pycircdb

User Guide:

  • Installation
  • Usage

API Reference:

  • Main CLI Module
  • Configuration
  • Utilities
pycircdb
  • Index

Index

C | F | L | M | P | R | T | U | Z

C

  • check_sums() (in module utils.md5sum_check)
  • config
    • module
  • create_config() (in module config)

F

  • file_path (config.ToolConfig attribute)

L

  • load_config() (in module config)

M

  • main
    • module
  • max_tasks (config.ToolConfig attribute)
  • module
    • config
    • main
    • utils
    • utils.md5sum_check
    • utils.output_mapping

P

  • print_config_panel() (in module config)
  • process_pipeline() (in module main)

R

  • reference (config.ToolConfig attribute)
  • run_annotation() (in module main)
  • run_fasta() (in module main)
  • run_mirna() (in module main)
  • run_rbp() (in module main)
  • run_tool() (in module main)

T

  • ToolConfig (class in config)

U

  • utils
    • module
  • utils.md5sum_check
    • module
  • utils.output_mapping
    • module

Z

  • zero_based (config.ToolConfig attribute)

© Copyright 2026, Barry Digby.

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