pycircdb documentation

Welcome to the documentation for pycircdb!

User Guide:

• Installation
  • Requirements
• Usage
  • Global options
  • The configuration file
  • Commands

API Reference:

• Main CLI Module
  • process_pipeline()
  • run_annotation()
  • run_fasta()
  • run_mirna()
  • run_rbp()
  • run_tool()
• Configuration
  • ToolConfig
  • create_config()
  • load_config()
  • print_config_panel()
• Utilities
  • MD5 Checksum Tools
  • Output Mapping